Hotels in Harbor Island, CA: Compare 10+ Sites & Save

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641 Best Hotels in Harbor Island (Starting from $83)

Sheraton San Diego Resort
Sheraton San Diego Resort
Hotel
San Diego, CA, USA
0.3k from Harbor Island center

Accommodations, Pools, Parking, Romantic, Sheraton, Pet-friendly, 4-star, Lodgings, Hot tubs

8.1

Very Good

1105 reviews

$249
Average price / night
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Hilton San Diego Airport/Harbor Island
Hilton San Diego Airport/Harbor Island
Hotel
San Diego, CA, USA
0.8k from Harbor Island center

Accommodations, Pools, Parking, Romantic, Hilton , Pet-friendly, 3-star, Lodgings, Hot tubs

8.2

Very Good

756 reviews

$236
Average price / night
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Hampton Inn & Suites San Diego Airport Liberty Station
Hampton Inn & Suites San Diego Airport Liberty Station
Hotel
San Diego, CA, USA
1.1k from Harbor Island center

Accommodations, Pools, Parking, Pet-friendly, 3-star, Lodgings, Places to stay, Family, Accessible hotels

8.7

Fabulous

896 reviews

$227
Average price / night
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TownePlace Suites by Marriott San Diego Airport/Liberty Station
TownePlace Suites by Marriott San Diego Airport/Liberty Station
Hotel
San Diego, CA, USA
1.1k from Harbor Island center

Accommodations, Pools, Parking, Marriott , Pet-friendly, 3-star, Lodgings, Places to stay, Family

8.4

Very Good

295 reviews

$231
Average price / night
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Homewood Suites by Hilton San Diego Airport-Liberty Station
Homewood Suites by Hilton San Diego Airport-Liberty Station
Hotel
San Diego, CA, USA
1.5k from Harbor Island center

Accommodations, Pools, Parking, Romantic, Hilton , Pet-friendly, 3-star, Lodgings, Hot tubs

9.1

Superb

379 reviews

$251
Average price / night
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Courtyard San Diego Airport/Liberty Station
Courtyard San Diego Airport/Liberty Station
Hotel
San Diego, CA, USA
1.6k from Harbor Island center

Accommodations, Pools, Parking, Marriott , 3-star, Lodgings, Hot tubs, Places to stay, Family

8.6

Fabulous

273 reviews

$237
Average price / night
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Courtyard by Marriott San Diego Airport/Liberty Station
Courtyard by Marriott San Diego Airport/Liberty Station
Hotel
2592 Laning Rd, San Diego, CA, 92106, United States
1.6k from Harbor Island center

AC, Bar, Breakfast Available, Business Services, Elevator, Extra Bed, Fitness Equipment, Frontdesk 24 Hour, Hot Tub

9.2

Superb

1309 reviews

$203
Average price / night
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Humphreys Half Moon Inn
Humphreys Half Moon Inn
Hotel
San Diego, CA, USA
2.3k from Harbor Island center

Accommodations, Pools, Parking, Romantic, Boutique, 3-star, Lodgings, Hot tubs, Places to stay

8.7

Fabulous

1270 reviews

$299
Average price / night
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DoubleTree by Hilton San Diego Bayside
DoubleTree by Hilton San Diego Bayside
Hotel
4875 N Harbor Dr, San Diego, CA, 92106, United States
2.2k from Harbor Island center

AC, Airport Transportation, Bar, Breakfast Available, Business Services, Crib, Elevator, Extra Bed, Fitness Equipment

8.4

Very Good

1006 reviews

$168
Average price / night
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Best Western Yacht Harbor Hotel
Best Western Yacht Harbor Hotel
Hotel
San Diego, CA, USA
2.3k from Harbor Island center

Accommodations, Pools, Parking, Best western , 3-star, Lodgings, Hot tubs, Places to stay, Accessible hotels

7.9

Good

4504 reviews

$159
Average price / night
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Bay Club Hotel and Marina
Bay Club Hotel and Marina
Hotel
San Diego, CA, USA
2.5k from Harbor Island center

Accommodations, Pools, Parking, Romantic, 3-star, Lodgings, Jacuzzis, Places to stay, Accessible hotels

8.6

Fabulous

1050 reviews

$275
Average price / night
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Travelodge by Wyndham San Diego SeaWorld
Travelodge by Wyndham San Diego SeaWorld
Hotel
San Diego, CA, USA
2.5k from Harbor Island center

Accommodations, Motels, Parking, Lodgings, Places to stay, Accessible hotels

5.8

Review score

441 reviews

$103
Average price / night
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The Monsaraz San Diego, Tapestry Collection by Hilton
The Monsaraz San Diego, Tapestry Collection by Hilton
Hotel
2912 Garrison St, San Diego, CA, 92106, United States
2.5k from Harbor Island center

AC, Bar, Breakfast Available, Business Services, Elevator, Fitness Equipment, Frontdesk 24 Hour, Heater, Housekeeping

8.6

Fabulous

714 reviews

$196
Average price / night
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Holiday Inn Express San Diego Airport-Old Town by IHG
Holiday Inn Express San Diego Airport-Old Town by IHG
Hotel
San Diego, CA, USA
2.5k from Harbor Island center

Cheap, Accommodations, Pools, Parking, Holiday inn , Lodgings, Places to stay, Accessible hotels

8.6

Fabulous

775 reviews

$222
Average price / night
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Bay Club Hotel & Marina
Bay Club Hotel & Marina
Hotel
2131 Shelter Island Dr, San Diego, CA, 92106, United States
2.5k from Harbor Island center

AC, Bar, Business Services, Crib, Elevator, Extra Bed, Fitness Equipment, Frontdesk 24 Hour, Hot Tub

9.2

Superb

3537 reviews

$186
Average price / night
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Comfort Inn San Diego Airport At The Harbor
Comfort Inn San Diego Airport At The Harbor
Hotel
San Diego, CA, USA
2.5k from Harbor Island center

B&bs, Accommodations, Pools, Parking, Inns, Pet-friendly, Lodgings, Places to stay, Accessible hotels

6.9

Good

199 reviews

$138
Average price / night
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Hotel Aqua Mar
Hotel Aqua Mar
Hotel
San Diego, CA, USA
2.6k from Harbor Island center

Accommodations, Motels, Parking, Pet-friendly, Lodgings, Places to stay, Accessible hotels

6.5

Good

845 reviews

$125
Average price / night
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The Pearl Hotel
The Pearl Hotel
Hotel
San Diego, CA, USA
2.6k from Harbor Island center

Accommodations, Pools, Parking, Boutique, 4-star, Lodgings, Places to stay, Accessible hotels

8.3

Very Good

158 reviews

$224
Average price / night
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Americas Best Value Inn Loma Lodge
Americas Best Value Inn Loma Lodge
Hotel
3202 Rosecrans Street, San Diego, CA, 92110, United States
2.5k from Harbor Island center

AC, Business Services, Free Parking, Frontdesk 24 Hour, Housekeeping, Internet, Laundry, Microwave, No Smoking

6.8

Good

1003 reviews

$83
Average price / night
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Motel 6 San Diego, CA Airport Harbor
Motel 6 San Diego, CA Airport Harbor
Hotel
San Diego, CA, USA
2.6k from Harbor Island center

Accommodations, Pools, Parking, Pet-friendly, 3-star, Lodgings, Places to stay, Accessible hotels

7.2

Good

1336 reviews

$117
Average price / night
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Hotel Point Loma
Hotel Point Loma
Hotel
2933 Fenelon St., San Diego, CA, 92106, United States
2.6k from Harbor Island center

AC, Barbecue, Housekeeping, Internet, Microwave, No Smoking, Parking Available, TV

7.4

Good

401 reviews

$117
Average price / night
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Ramada by Wyndham San Diego Airport
Ramada by Wyndham San Diego Airport
Hotel
San Diego, CA, USA
2.6k from Harbor Island center

Accommodations, Pools, Parking, Ramada, Lodgings, Places to stay, Accessible hotels

7.3

Good

451 reviews

$119
Average price / night
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Motel 6 San Diego Airport - Harbor
Motel 6 San Diego Airport - Harbor
Hotel
2353 Pacific Highway, San Diego, CA, 92101, United States
2.6k from Harbor Island center

AC, Free Parking, Frontdesk 24 Hour, Internet, Laundry, Pool, TV

7.2

Good

1005 reviews

$109
Average price / night
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Solis Place in Old Town
Solis Place in Old Town
Hotel
San Diego, CA, USA
2.6k from Harbor Island center

Cheap, Accommodations, Motels, Lodgings, Places to stay, Self-catering, Accessible hotels

8.4

Very Good

109 reviews

$85
Average price / night
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Sea Harbor Hotel - San Diego
Sea Harbor Hotel - San Diego
Hotel
San Diego, CA, USA
2.6k from Harbor Island center

Accommodations, Pools, Parking, Lodgings, Places to stay, Accessible hotels

7.5

Good

276 reviews

$150
Average price / night
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Wyndham San Diego Bayside
Wyndham San Diego Bayside
Hotel
San Diego, CA, USA
2.7k from Harbor Island center

Accommodations, Pools, Parking, Romantic, Pet-friendly, 3-star, Lodgings, Places to stay, Accessible hotels

7.9

Good

2132 reviews

$227
Average price / night
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Homewood Suites by Hilton San Diego Downtown/Bayside
Homewood Suites by Hilton San Diego Downtown/Bayside
Hotel
San Diego, CA, USA
2.7k from Harbor Island center

Accommodations, Pools, Parking, Romantic, Hilton , Pet-friendly, 3-star, Lodgings, Places to stay

8.2

Very Good

1170 reviews

$279
Average price / night
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Pro Tip:
VacationByOwnerRentals aggregates the best inventory from leading travel sites, including Booking.com, Agoda.com, Expedia.com, Vrbo.com, and Airbnb.com. Use our Advanced Filters to compare verified homes, villas, cabins, condos, cottages, vacation rentals, hotels, and eco-friendly stays. Our goal is to help you find the absolute best Hotels in Harbor Island.

Where to stay in Harbor Island? Best neighborhoods & areas

Harbor Island Hotels on the Map

Frequently Asked Questions

You can explore 641 verified hotels in Harbor Island. These include a range of options from luxury resorts and boutique hotels to budget-friendly accommodations suitable for different travel styles.

Hotel prices in Harbor Island vary depending on the season, location, and property type. Rates typically start from around $83 per night, with higher prices for premium hotels, central locations, or peak travel dates.

Most hotels in Harbor Island include amenities such as Guest Services, Wheelchair Accessible, and Accessibility. Additional features like breakfast, parking, or resort facilities may vary by property, so it’s helpful to review the details before booking.

You can identify top-rated hotels in Harbor Island by sorting listings based on guest ratings and reviews. Looking at recent feedback, overall scores, and review volume can help you find properties that consistently deliver a high-quality experience.

For popular travel periods or busy locations, booking 30 to 60 days in advance is generally recommended to secure preferred options. During quieter periods, you may find more flexibility and availability closer to your travel dates.

Yes, some hotels in Harbor Island welcome pets. Currently, 26 listings allow pets, although policies may vary. It’s a good idea to review any pet-related rules before booking.

Many hotels in Harbor Island offer flexible or refundable booking options. Checking the cancellation policy before confirming your reservation can help you choose a rate that suits your travel plans.